Pierre Baduel

Polyploidy, Epigenetics & Transposable Elements @IBENS

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- Publications -


Baduel P and Sasaki E. The genetic basis of epigenetic variation and its consequences for adaptation. Current Opinion in Plant Biology, 10.1016/j.pbi.2023.102409, 08/2023.


Sasaki T, Ro K, Caillieux E, Manabe R, Bohl‐Viallefond G, Baduel P, Colot V, Kakutani T, Quadrana L. Fast co‐evolution of anti‐silencing systems shapes the invasiveness of Mu‐like DNA transposons in eudicots. The EMBO Journal, 10.15252/embj.2021110070,04/2022.


Baduel P, Quadrana L. Jumpstarting evolution: How transposition can facilitate adaptation to rapid environmental changes. Current Opinion in Plant Biology, 10.1016/j.pbi.2021.102043, 04/2021.

Baduel P, Leduque B, Ignace A, Gy I, Gil J, Loudet O, Colot V, Quadrana L. Genetic and environmental modulation of transposition shapes the evolutionary potential of Arabidopsis thaliana. Genome Biology, 10.1186/s13059-021-02348-5, 05/2021.

Baduel P, Colot V. The epiallelic potential of transposable elements and its evolutionary significance in plants. Philosophical Transactions of the Royal Society B, 10.1098/rstb.2020.0123, 04/2021.

Baduel P, Quadrana L, Colot V. Efficient detection of transposable element insertion polymorphisms between genomes using short-read sequencing data. Plant Transposable Elements, Methods in Molecular Biology, 10.1007/978-1-0716-1134-0_15, 04/2021.


Baduel P, Quadrana L, Hunter B, Bomblies K, Colot V. Relaxed purifying selection in autopolyploids drives transposable element over-accumulation which provides variants for local adaptation. Nature Communications,10.1038/s41467-019-13730-0, 12/2019

Monnahan P*, Kolář F*, Baduel P*, Sailer C, Koch J, Horvath R, Laenen B, Schmickl R, Paajanen P, Fuxová G, Holcová M, Arnold B, Weismann C, Marhold K, Slotte T, Bomblies K, Yant L. Pervasive population genomic consequences of genome duplication in A. arenosa. Nature Ecology & Evolution, 10.1038/s41559-019-0807-4, 02/2019
*authors contributed equally


Baduel P, Bray S, Vallejo-Marin M, Kolář F, Yant L. The ‘Polyploid Hop’: shifting challenges and opportunities over the evolutionary lifespan of genome duplications. Frontiers in Ecology and Evolution, 0.3389/fevo.2018.00117 07/2018

Baduel P, Hunter B, Yeola S, Bomblies K. Genetic basis and evolution of rapid cycling in railway populations of tetraploid Arabidopsis arenosa. PLoS Genetics, 0.1371/journal.pgen.1007510, 07/2018


Wilton PR, Baduel P, Landon MM, Wakeley J. Population structure and coalescence in pedigrees: Comparisons to the structured coalescent and a framework for inference. Theoretical Population Biology, 0.1016/j.tpb.2017.01.004, 01/2017


Baduel P, Arnold B, Weisman C, Hunter B, Bomblies K. Habitat-associated life history and stress-tolerance variation in A. arenosa. Plant Physiology, 0.1104/pp.15.01875, 03/2016